BLASTN 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BA0AB006C08SP1|AL425505
(1065 letters)
Database: Klactis 3X assemblage 11/02
1807 sequences; 10,358,551 total letters
Searching....done
Score E
Sequences producing significant alignments: (bits) Value
3x_Contig849 1558 0.0
>3x_Contig849
Length = 3479
Score = 1558 bits (784), Expect = 0.0
Identities = 820/832 (98%), Gaps = 2/832 (0%)
Strand = Plus / Minus
Query: 236 cagaagttgcatcaattttacaagaccctgtca-tgcaatctatactctcacaagctcag 294
||||||||||||||||||||||||||||||||| ||||||||||||||||| ||||||||
Sbjct: 3479 cagaagttgcatcaattttacaagaccctgtcaatgcaatctatactctcaaaagctcag 3420
Query: 295 caaaatcctgctgctttacaggaacacatgagaaacccagacgtcttcaagaagattcaa 354
|||||||||||||||||| |||||||||||||||||||||||||||||||||| ||||||
Sbjct: 3419 caaaatcctgctgctttaaaggaacacatgagaaacccagacgtcttcaagaaaattcaa 3360
Query: 355 accttgatcgccgctggtataatcaagactcgctagttctacagacagtcagtcatatta 414
||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3359 accttaatcgccgctggtataatcaagactcgctagttctacagacagtcagtcatatta 3300
Query: 415 ctcgacctgaaacttcaacatgaattagtatatatacacgcctatgtttagcatttaatt 474
|||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3299 ctcgccctgaaacttcaacatgaattagtatatatacacgcctatgtttagcatttaatt 3240
Query: 475 ctcttccagatatatatctataccattattctatcagcattgtctgatgggctttatgta 534
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3239 ctcttccagatatatatctataccattattctatcagcattgtctgatgggctttatgta 3180
Query: 535 ttaatgcaaattatgtttccattattaatttctccatatcattttctgatatttatcttc 594
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3179 ttaatgcaaattatgtttccattattaatttctccatatcattttctgatatttatcttc 3120
Query: 595 tacaaacaacattgaaatctacagatgaggaactatatacacagaaaaagggcaaagagt 654
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3119 tacaaacaacattgaaatctacagatgaggaactatatacacagaaaaagggcaaagagt 3060
Query: 655 aacataatgggcgttgaggatcgtttaaatcgtaaacagcagcgactcgctgcccttaag 714
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3059 aacataatgggcgttgaggatcgtttaaatcgtaaacagcagcgactcgctgcccttaag 3000
Query: 715 gtatcttaccaggaattagagaagaaatttcagacgttggctcacgaattacatatgtat 774
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2999 gtatcttaccaggaattagagaagaaatttcagacgttggctcacgaattacatatgtat 2940
Query: 775 gttttaccttattctatatttccaagtttcggcggctaaattgcaacgatactaaccaaa 834
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2939 gttttaccttattctatatttccaagtttcggcggctaaattgcaacgatactaaccaaa 2880
Query: 835 aaaaaatattaacagaactgagacgccagaaaagattaacttgaaacatattgctgatct 894
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2879 aaaaaatattaacagaactgagacgccagaaaagattaacttgaaacatattgctgatct 2820
Query: 895 aaagctttacaatgagctccgtgacactgggcttagactagttcagatggttgccgatga 954
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2819 aaagctttacaatgagctccgtgacactgggcttagactagttcagatggttgccgatga 2760
Query: 955 gaamcagtgtwagatgaaagacgtgtttgagggaatcggttatgagawgaaagattgata 1014
||| |||||| ||||||||||||||||||||| |||||||||||||| ||||||||||||
Sbjct: 2759 gaaacagtgtaagatgaaagacgtgtttgaggaaatcggttatgagatgaaagattgata 2700
Query: 1015 gttacccggtctatgttttgttttcgtttttgttatc-wtttaatggtagaa 1065
||||||||||||||||||||||||||||||||||||| |||||||||||||
Sbjct: 2699 gttacccggtctatgttttgttttcgtttttgttatcattttaatggtagaa 2648
Database: Klactis 3X assemblage 11/02
Posted date: Nov 27, 2002 12:23 PM
Number of letters in database: 10,358,551
Number of sequences in database: 1807
Lambda K H
1.38 0.711 1.31
Gapped
Lambda K H
1.38 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 8473
Number of Sequences: 1807
Number of extensions: 8473
Number of successful extensions: 66
Number of sequences better than 1.0e-20: 1
length of query: 1065
length of database: 10,358,551
effective HSP length: 16
effective length of query: 1049
effective length of database: 10,329,639
effective search space: 10835791311
effective search space used: 10835791311
T: 0
A: 40
X1: 6 (11.9 bits)
X2: 15 (29.8 bits)
S1: 12 (24.3 bits)
S2: 50 (99.9 bits)